Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567367: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319757' containing sample 'VET1904R' from individual 'VET0212'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4M spots, 805.6M bases, 361.4Mb downloads

UUID: f7be35e9-efe3-48c7-b351-c19b5325bea5

Design: Illumina sequencing of Staphylococcus aureus VET1904R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228833 • SRP042813 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1904R

SAMN02404323 • SRS626881 • All experiments • All runs

Organism: Staphylococcus aureus VET1904R

Library:

Name: Pond-319757

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470811.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDH1

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55246

research_project: RP-513

root_sample_id: SM-4PO9H

sample_id: SM-5CDH1

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4M spots, 805.6M bases, 361.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1329236	2,015,531	407.1M	182.3Mb	2014-06-03
SRR1342189	1,972,769	398.5M	179Mb	2014-06-05

ID:: 810184

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